BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A11LP1|AL425060
(1040 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 1985 0.0
>3x_Contig1659
Length = 17570
Score = 1985 bits (1000), Expect = 0.0
Identities = 1034/1043 (99%), Gaps = 4/1043 (0%)
Strand = Plus / Minus
Query: 1 attgttcaatgtctaagacacgacgaggaccaatacgtagcgagattcattctcgacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 attgttcaatgtctaagacacgacgaggaccaatacgtagcgagattcattctcgacacc 4682
Query: 61 gcgaagatcagtcttcaattctctcatcaaatcatttggaacatgttagcaaacgagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 gcgaagatcagtcttcaattctctcatcaaatcatttggaacatgttagcaaacgagtac 4622
Query: 121 caggacgacgaggctaccatagaggatccaataaagcccaccctggaacacattagggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 caggacgacgaggctaccatagaggatccaataaagcccaccctggaacacattagggca 4562
Query: 181 aagatgattgatacgtacgatgacgaggcaaaacaatactacgagagagaattcaccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 aagatgattgatacgtacgatgacgaggcaaaacaatactacgagagagaattcaccttc 4502
Query: 241 ttcaacgatgttaccagcatttctggtaaattgaaaccttacatcaagaagacaaaggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 ttcaacgatgttaccagcatttctggtaaattgaaaccttacatcaagaagacaaaggcg 4442
Query: 301 gagaagaaagccaaaattgacgaagagatgagtaagattgtagttcagaaggacgtctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 gagaagaaagccaaaattgacgaagagatgagtaagattgtagttcagaaggacgtctac 4382
Query: 361 ttgccaagcaatccagatggaattgtcgttgatatcgacagaaagagcggtaagccttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 ttgccaagcaatccagatggaattgtcgttgatatcgacagaaagagcggtaagccttta 4322
Query: 421 caatcgcatgccaaggctcccttcatggccacgttcagagtgaaaaaggacgattctgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 caatcgcatgccaaggctcccttcatggccacgttcagagtgaaaaaggacgattctgag 4262
Query: 481 gagaaatggcagagtgccattttcaaagttggtgacgattgtagacaagacgtgttggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 gagaaatggcagagtgccattttcaaagttggtgacgattgtagacaagacgtgttggcg 4202
Query: 541 ttacaactgatctctttgttcagatccatttggtcacacatcggactagacgtgtacgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 ttacaactgatctctttgttcagatccatttggtcacacatcggactagacgtgtacgtc 4142
Query: 601 ttcccctacagagtcactgccactgcaccagggtgcggtgtcatcgacgtcttaccagac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 ttcccctacagagtcactgccactgcaccagggtgcggtgtcatcgacgtcttaccagac 4082
Query: 661 tccatatcaagagacatgttaggccgtgaagctgtgaatggattatacgaatatttcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 tccatatcaagagacatgttaggccgtgaagctgtgaatggattatacgaatatttcatc 4022
Query: 721 agtaaattcggtaacgagagtdccattgaattccaaagagcaagaaacaacttcgtgaaa 780
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 agtaaattcggtaacgagagtaccattgaattccaaagagcaagaaacaacttcgtgaaa 3962
Query: 781 tccttagccgcttacagcgtcatctcctacctactacaattcaaggatagacacaacggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 tccttagccgcttacagcgtcatctcctacctactacaattcaaggatagacacaacggt 3902
Query: 841 aatatcatgtacgactcacagggccattgtctacacattgatttcggttttatattcgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 aatatcatgtacgactcacagggccattgtctacacattgatttcggttttatattcgat 3842
Query: 901 atcgtgcctgggggagtgaaattcgaagccgtgcccttcaagctaacaaaagagatggtc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 atcgtgcctgggggagtgaaattcgaagccgtgcccttcaagctaacaaaagagatggtc 3782
Query: 961 aaagtcatgggcggta-caaacacacccaggcgttcag-caattcggagatctatgcgtt 1018
|||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 3781 aaagtcatgggcggtagccaacacacccaggcgttcagccaattcgaagatctatgcgtt 3722
Query: 1019 gca--cttyctaggtataagacc 1039
||| || ||||||||||||||
Sbjct: 3721 gcaactttcctaggtataagacc 3699
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6199
Number of Sequences: 1807
Number of extensions: 6199
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 1040
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1024
effective length of database: 10,329,639
effective search space: 10577550336
effective search space used: 10577550336
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)